Handle the FORCIS Foraminifera Database

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Documentation for package ‘forcis’ version 1.0.1

• DESCRIPTION file.
• User guides, package vignettes and other documentation.

Help Pages

computations	Compute count conversions
compute_abundances	Compute count conversions
compute_concentrations	Compute count conversions
compute_frequencies	Compute count conversions
convert_to_long_format	Reshape and simplify FORCIS data
data_to_sf	Convert a data frame into an sf object
download_forcis_db	Download the FORCIS database
filter_by_bbox	Filter FORCIS data by a spatial bounding box
filter_by_month	Filter FORCIS data by month of sampling
filter_by_ocean	Filter FORCIS data by ocean
filter_by_polygon	Filter FORCIS data by a spatial polygon
filter_by_species	Filter FORCIS data by species
filter_by_year	Filter FORCIS data by year of sampling
geom_basemap	Add a World basemap to a ggplot object
get_available_versions	Get available versions of the FORCIS database
get_ocean_names	Get World ocean names
get_required_columns	Get required column names
get_species_names	Get species names from column names
get_version_metadata	Print information of a specific version of the FORCIS database
ggmap_data	Map the spatial distribution of FORCIS data
plot_record_by_depth	Plot sample records by depth of collection
plot_record_by_month	Plot sample records by month
plot_record_by_season	Plot sample records by season
plot_record_by_year	Plot sample records by year
read_cpr_north_data	Read FORCIS data
read_cpr_south_data	Read FORCIS data
read_data	Read FORCIS data
read_plankton_nets_data	Read FORCIS data
read_pump_data	Read FORCIS data
read_sediment_trap_data	Read FORCIS data
select_forcis_columns	Select columns in FORCIS data
select_taxonomy	Select a taxonomy in FORCIS data