| metaMA-package | Meta-analysis for MicroArrays |
| calcfit2Diffrep | Empirical Bayes statistics from limma analysis with unpaired data |
| directEScombi | Direct effect size combination |
| directpvalcombi | Direct p-value combination |
| effectsize | Calculates effect sizes from given t or moderated t statistics |
| EScombination | Effect size combination for unpaired data |
| EScombination.paired | Effect size combination for paired data |
| IDDIRR | Integration-driven Discovery and Integration-driven Revision Rates |
| metaMA | Meta-analysis for MicroArrays |
| pvalcombination | P-value combination for unpaired data |
| pvalcombination.paired | P-value combination for paired data |
| row.ttest.stat | Row t-tests |
| row.ttest.statp | Row paired t-tests |
| rowVars | Row variance of an array |
| Singhdata | Singh dataset |