| autoplot.bundle | Plots a cross section of a cylinder bundle using *ggplot2* |
| CallaghanCompartment | Callaghan's model for restricted diffusion in a cylinder |
| CylinderBundleCompartment | Cylinder bundle compartment class |
| CylinderCompartment | Cylinder compartment class |
| CylinderRadialCompartment | Cylinder radial compartment class |
| NeumanCompartment | Neuman's model for restricted diffusion in a cylinder |
| plot.bundle | Plots a cross section of a cylinder bundle |
| plot3d | Plots a 3D representation of a cylinder bundle using *plotly* |
| run_app | Runs the MIDI Shiny web application |
| simulate_bundle | Generates a cross section of a cylinder bundle |
| SodermanCompartment | Soderman's model for restricted diffusion in a cylinder |
| StaniszCompartment | Stanisz's model for restricted diffusion in a cylinder |
| VanGelderenCompartment | Van Gelderen's model for restricted diffusion in a cylinder |