| metafolio-package | metafolio: An R package to simulate metapopulations for portfolio optimization |
| add_dens_polygon | Add a kernel density polygon |
| annotate | Add annotations to panel |
| count_quasi_exts | Take 'meta_sim' output objects and count quasi extinctions |
| create_asset_weights | Create an asset weights matrix |
| custom_bw | Custom bandwidth |
| CVaR | Conditional Value at Risk |
| est_beta_params | Get beta parameters from mean and variance |
| fastlm | Super fast linear regression |
| fit_ricker | Fit Ricker linear regression |
| generate_env_ts | Create an environmental time series. |
| generate_straying_matrix | Generate a matrix of straying proportions within a metapopulation |
| get_conserv_plans_mv | Run simulation for conservation schemes |
| get_efficient_frontier | Get the efficient frontier from mean and variance values |
| get_port_vals | Get portfolio mean and variance values |
| get_quantile_contour | Get quantile contour |
| gg_color_hue | ggplot2-like colour scale in HCL space |
| impl_error | Add implementation error |
| is_element | Check if x is an element of y. |
| metafolio | metafolio: An R package to simulate metapopulations for portfolio optimization |
| metasim_base | Base-level metapopulation simulation function |
| meta_sim | Run a single metapopulation simulation. |
| monte_carlo_portfolios | Monte Carlo asset weights into portfolios |
| my.axis | Add a pretty axis |
| optim_thermal | Optimize to find optimal max productivity Ricker a |
| plot_cons_plans | Plot conservation plans in mean-variance space |
| plot_correlation_between_returns | Plot correlation of returns (i.e. metapopulation abundance) across stocks. |
| plot_efficient_portfolios | Basic plot of efficient portfolio and asset contributions |
| plot_panel_lines | Standard matrix plot of values by stream for one panel: |
| plot_rickers | Plot sample Ricker curves for each stock |
| plot_sim_ts | Plot various time series from a simulation run |
| plot_sp_A_ts | Plot sample time series from a portfolio simulation |
| ricker | A simple Ricker model |
| ricker_escapement | Assign a salmon escapement target based on a Ricker curve |
| ricker_v_t | Ricker stock-recruit function with specified error |
| run_cons_plans | Run conservation plans and return the portfolio mean and variance values |
| thermal_area | Return desired squared deviation between desired area and actual area under a curve |
| thermal_curve_a | Create thermal tolerance curves. |
| thermal_integration | Integrate thermal tolerance curves to get maximum Ricker a values |
| VaR | Value at Risk |