Last updated on 2025-12-14 03:49:46 CET.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-debian-clang | 0.2.3 | 64.71 | 518.85 | 583.56 | OK | |
| r-devel-linux-x86_64-debian-gcc | 0.2.3 | 57.45 | 346.21 | 403.66 | ERROR | |
| r-devel-linux-x86_64-fedora-clang | 0.2.3 | 199.00 | 837.79 | 1036.79 | ERROR | |
| r-devel-linux-x86_64-fedora-gcc | 0.2.3 | 141.00 | 436.77 | 577.77 | ERROR | |
| r-devel-windows-x86_64 | 0.2.3 | 91.00 | 483.00 | 574.00 | OK | |
| r-patched-linux-x86_64 | 0.2.3 | 63.76 | 500.19 | 563.95 | OK | |
| r-release-linux-x86_64 | 0.2.3 | 65.31 | 469.63 | 534.94 | ERROR | |
| r-release-macos-arm64 | 0.2.3 | OK | ||||
| r-release-macos-x86_64 | 0.2.3 | 72.00 | 306.00 | 378.00 | OK | |
| r-release-windows-x86_64 | 0.2.3 | 90.00 | 475.00 | 565.00 | OK | |
| r-oldrel-macos-arm64 | 0.2.3 | NOTE | ||||
| r-oldrel-macos-x86_64 | 0.2.3 | 75.00 | 354.00 | 429.00 | NOTE | |
| r-oldrel-windows-x86_64 | 0.2.3 | 88.00 | 643.00 | 731.00 | OK |
Version: 0.2.3
Check: examples
Result: ERROR
Running examples in ‘CAESAR.Suite-Ex.R’ failed
The error most likely occurred in:
> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: CAESAR.CTDEP
> ### Title: Test Cell Type Differentially Enriched Pathways
> ### Aliases: CAESAR.CTDEP
>
> ### ** Examples
>
> data(toydata)
>
> seu <- toydata$seu
> pathway_list <- toydata$pathway_list
> cts <- levels(seu)[1:2]
>
> enrich.score <- CAESAR.enrich.score(seu, pathway_list)
Calculate co-embedding distance...
Error:
! The `slot` argument of `GetAssayData()` was deprecated in SeuratObject
5.0.0 and is now defunct.
ℹ Please use the `layer` argument instead.
Backtrace:
▆
1. └─CAESAR.Suite::CAESAR.enrich.score(seu, pathway_list)
2. ├─Seurat::GetAssayData(object = seu, slot = "data", assay = assay.dist)
3. └─SeuratObject:::GetAssayData.Seurat(...)
4. └─SeuratObject::.Deprecate(...)
5. └─lifecycle::deprecate_stop(...)
6. └─lifecycle:::deprecate_stop0(msg)
7. └─rlang::cnd_signal(...)
Execution halted
Flavors: r-devel-linux-x86_64-debian-gcc, r-release-linux-x86_64
Version: 0.2.3
Check: examples
Result: ERROR
Running examples in ‘CAESAR.Suite-Ex.R’ failed
The error most likely occurred in:
> ### Name: CAESAR.CTDEP
> ### Title: Test Cell Type Differentially Enriched Pathways
> ### Aliases: CAESAR.CTDEP
>
> ### ** Examples
>
> data(toydata)
>
> seu <- toydata$seu
> pathway_list <- toydata$pathway_list
> cts <- levels(seu)[1:2]
>
> enrich.score <- CAESAR.enrich.score(seu, pathway_list)
Calculate co-embedding distance...
Error:
! The `slot` argument of `GetAssayData()` was deprecated in SeuratObject
5.0.0 and is now defunct.
ℹ Please use the `layer` argument instead.
Backtrace:
▆
1. └─CAESAR.Suite::CAESAR.enrich.score(seu, pathway_list)
2. ├─Seurat::GetAssayData(object = seu, slot = "data", assay = assay.dist)
3. └─SeuratObject:::GetAssayData.Seurat(...)
4. └─SeuratObject::.Deprecate(...)
5. └─lifecycle::deprecate_stop(...)
6. └─lifecycle:::deprecate_stop0(msg)
7. └─rlang::cnd_signal(...)
Execution halted
Flavors: r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc
Version: 0.2.3
Check: installed package size
Result: NOTE
installed size is 7.4Mb
sub-directories of 1Mb or more:
data 1.4Mb
libs 5.5Mb
Flavors: r-oldrel-macos-arm64, r-oldrel-macos-x86_64