Last updated on 2025-09-11 03:49:51 CEST.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-debian-clang | 1.1.4 | 14.26 | 245.61 | 259.87 | OK | |
| r-devel-linux-x86_64-debian-gcc | 1.1.4 | 10.07 | 241.70 | 251.77 | OK | |
| r-devel-linux-x86_64-fedora-clang | 1.1.4 | 336.39 | OK | |||
| r-devel-linux-x86_64-fedora-gcc | 1.1.4 | 408.21 | OK | |||
| r-devel-windows-x86_64 | 1.1.4 | 20.00 | 184.00 | 204.00 | OK | |
| r-patched-linux-x86_64 | 1.1.4 | 13.34 | 239.71 | 253.05 | OK | |
| r-release-linux-x86_64 | 1.1.4 | 14.24 | 305.48 | 319.72 | OK | |
| r-release-macos-arm64 | 1.1.4 | 102.00 | OK | |||
| r-release-macos-x86_64 | 1.1.4 | 188.00 | ERROR | |||
| r-release-windows-x86_64 | 1.1.4 | 18.00 | 187.00 | 205.00 | OK | |
| r-oldrel-macos-arm64 | 1.1.4 | 98.00 | OK | |||
| r-oldrel-macos-x86_64 | 1.1.4 | 186.00 | ERROR | |||
| r-oldrel-windows-x86_64 | 1.1.4 | 24.00 | 242.00 | 266.00 | OK |
Version: 1.1.4
Check: tests
Result: ERROR
Running ‘testthat.R’ [83s/135s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(mapi)
>
> test_check("mapi")
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Estimated halfwidth: 286.835888
Estimated halfwidth: 143.417944
Linking to GEOS 3.13.0, GDAL 3.8.5, PROJ 9.5.1; sf_use_s2() is TRUE
Building local cartesian grid...
... 1071 cells
Building worldwide lat/lon grid...
Resolution: 5, Area (km^2): 209903.548034604, Spacing (km): 452.492014449456, CLS (km): 517.004996903084
... 2432 cells
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.536, system: 0.062, elapsed: 1.898 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.046, system: 0.199, elapsed: 11.171 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.195, system: 0.021, elapsed: 0.295 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 4.004, system: 0.314, elapsed: 6.227 seconds]
Computing values for grid cells...
... done. [user: 0.167, system: 0.007, elapsed: 0.269 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 15.481, system: 0.638, elapsed: 20.876 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.728, system: 0.097, elapsed: 2.385 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.444, system: 0.329, elapsed: 14.591 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.190, system: 0.018, elapsed: 0.257 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.931, system: 0.259, elapsed: 6.481 seconds]
Computing values for grid cells...
... done. [user: 0.171, system: 0.004, elapsed: 0.491 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 15.999, system: 0.739, elapsed: 25.070 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.651, system: 0.054, elapsed: 4.751 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.293, system: 0.226, elapsed: 22.832 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.192, system: 0.016, elapsed: 0.397 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.966, system: 0.285, elapsed: 6.934 seconds]
Computing values for grid cells...
... done. [user: 0.171, system: 0.008, elapsed: 0.228 seconds]
Starting 4 permutations...
... parallelized over 2 cores ...
1 2 3 4
... computing probabilities from permuted values ...
... done. [user: 1.233, system: 0.267, elapsed: 1.602 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 17.141, system: 0.890, elapsed: 38.166 seconds]
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.645, system: 0.072, elapsed: 3.375 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.168, system: 0.127, elapsed: 15.038 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.189, system: 0.015, elapsed: 0.321 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.821, system: 0.186, elapsed: 6.597 seconds]
Computing values for grid cells...
... done. [user: 0.164, system: 0.004, elapsed: 0.282 seconds]
Starting 50 permutations...
... serially ...
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... computing probabilities from permuted values ...
... done. [user: 10.361, system: 0.462, elapsed: 17.138 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 26.011, system: 0.908, elapsed: 44.091 seconds]
Significant areas aggregation, with percentile filter minQ > 0.000000 and alpha = 0.050000 ...
... 1 upper-tail and 3 lower-tail significant areas returned
Building local cartesian grid...
... 1045 cells
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-MAPI_Varicell.R:15:5'): MAPI_Varicell ────────────────────────
sd(sf::st_area(grid.var)) (`actual`) not equal to 963339.563502512 (`expected`).
`actual`: 963429.6
`expected`: 963339.6
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
Error: Test failures
Execution halted
Flavor: r-release-macos-x86_64
Version: 1.1.4
Check: tests
Result: ERROR
Running ‘testthat.R’ [80s/118s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(mapi)
>
> test_check("mapi")
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Estimated halfwidth: 286.835888
Estimated halfwidth: 143.417944
Linking to GEOS 3.13.0, GDAL 3.8.5, PROJ 9.5.1; sf_use_s2() is TRUE
Building local cartesian grid...
... 1071 cells
Building worldwide lat/lon grid...
Resolution: 5, Area (km^2): 209903.548034604, Spacing (km): 452.492014449456, CLS (km): 517.004996903084
... 2432 cells
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.500, system: 0.048, elapsed: 2.439 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 8.910, system: 0.073, elapsed: 14.198 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.184, system: 0.013, elapsed: 0.299 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.532, system: 0.169, elapsed: 6.244 seconds]
Computing values for grid cells...
... done. [user: 0.158, system: 0.003, elapsed: 0.270 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 14.812, system: 0.323, elapsed: 24.312 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.436, system: 0.026, elapsed: 2.353 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 8.870, system: 0.059, elapsed: 13.490 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.179, system: 0.011, elapsed: 0.277 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.654, system: 0.172, elapsed: 5.689 seconds]
Computing values for grid cells...
... done. [user: 0.155, system: 0.002, elapsed: 0.157 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 14.819, system: 0.293, elapsed: 22.726 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.277, system: 0.026, elapsed: 1.459 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.350, system: 0.289, elapsed: 15.068 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.195, system: 0.020, elapsed: 0.395 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.776, system: 0.327, elapsed: 6.375 seconds]
Computing values for grid cells...
... done. [user: 0.157, system: 0.013, elapsed: 0.176 seconds]
Starting 4 permutations...
... parallelized over 2 cores ...
1 2 4 3
... computing probabilities from permuted values ...
... done. [user: 1.078, system: 0.280, elapsed: 1.472 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 16.408, system: 0.999, elapsed: 25.761 seconds]
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.963, system: 0.134, elapsed: 3.105 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.015, system: 0.252, elapsed: 13.250 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.191, system: 0.012, elapsed: 0.246 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.738, system: 0.200, elapsed: 6.037 seconds]
Computing values for grid cells...
... done. [user: 0.165, system: 0.003, elapsed: 0.176 seconds]
Starting 50 permutations...
... serially ...
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... computing probabilities from permuted values ...
... done. [user: 10.155, system: 0.490, elapsed: 14.979 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 25.851, system: 1.130, elapsed: 38.752 seconds]
Significant areas aggregation, with percentile filter minQ > 0.000000 and alpha = 0.050000 ...
... 1 upper-tail and 3 lower-tail significant areas returned
Building local cartesian grid...
... 1045 cells
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-MAPI_Varicell.R:15:5'): MAPI_Varicell ────────────────────────
sd(sf::st_area(grid.var)) (`actual`) not equal to 963339.563502512 (`expected`).
`actual`: 963429.6
`expected`: 963339.6
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
Error: Test failures
Execution halted
Flavor: r-oldrel-macos-x86_64