Changes in UGENE v. 40
Alignment Editor
- Multi-row selection support.
- The "Build Tree" dialog now has all PhyML algorithms listed.
- A new option to move selected sequences from one document to another.
- The grouping mode: sorting by the size of a group and showing group sizes in the name list.
Sanger Editor
- A new visualization mode: show alternative mutations.
- Several vertical scrolling bugs have been fixed.
Sequence Viewer
- Speed, memory usage and precision of sequence graphs have been improved.
- Stability problems of auto-annotation routines have been fixed.
- Bugs, which appears while working with sequences larger when 2Gb, have been fixed.
Other improvements
- The "Smith-Waterman" algorithm support for CUDA has been improved.
- The Unicode support has been added for Newick, Plain text, Diff, VCF, SNP file formats.
- The "Random Sequence Generator" memory footprint and generation speed have been improved.
A complete list of changes can be found on the UGENE web site.