BamTools  2.4.0
BamTools::BamMultiReader Member List

This is the complete list of members for BamTools::BamMultiReader, including all inherited members.

BamMultiReader(void)BamTools::BamMultiReader
Close(void)BamTools::BamMultiReader
CloseFile(const std::string &filename)BamTools::BamMultiReader
CreateIndexes(const BamIndex::IndexType &type=BamIndex::STANDARD)BamTools::BamMultiReader
Filenames(void) const BamTools::BamMultiReader
GetErrorString(void) const BamTools::BamMultiReader
GetHeader(void) const BamTools::BamMultiReader
GetHeaderText(void) const BamTools::BamMultiReader
GetMergeOrder(void) const BamTools::BamMultiReader
GetNextAlignment(BamAlignment &alignment)BamTools::BamMultiReader
GetNextAlignmentCore(BamAlignment &alignment)BamTools::BamMultiReader
GetReferenceCount(void) const BamTools::BamMultiReader
GetReferenceData(void) const BamTools::BamMultiReader
GetReferenceID(const std::string &refName) const BamTools::BamMultiReader
HasIndexes(void) const BamTools::BamMultiReader
HasOpenReaders(void) const BamTools::BamMultiReader
Jump(int refID, int position=0)BamTools::BamMultiReader
LocateIndexes(const BamIndex::IndexType &preferredType=BamIndex::STANDARD)BamTools::BamMultiReader
MergeByCoordinate enum valueBamTools::BamMultiReader
MergeByName enum valueBamTools::BamMultiReader
MergeOrder enum nameBamTools::BamMultiReader
Open(const std::vector< std::string > &filenames)BamTools::BamMultiReader
OpenFile(const std::string &filename)BamTools::BamMultiReader
OpenIndexes(const std::vector< std::string > &indexFilenames)BamTools::BamMultiReader
Rewind(void)BamTools::BamMultiReader
RoundRobinMerge enum valueBamTools::BamMultiReader
SetExplicitMergeOrder(BamMultiReader::MergeOrder order)BamTools::BamMultiReader
SetRegion(const BamRegion &region)BamTools::BamMultiReader
SetRegion(const int &leftRefID, const int &leftPosition, const int &rightRefID, const int &rightPosition)BamTools::BamMultiReader
~BamMultiReader(void)BamTools::BamMultiReader